Disease: Stomach Carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs937283
MDM2
0.716 0.200 12 68808384 5 prime UTR variant A/G snv 0.37 19
rs9282861
SULT1A1
0.658 0.440 16 28606193 missense variant C/T snv 31
rs920778
HOTAIR
0.633 0.480 12 53966448 intron variant G/A snv 0.57 36
rs909253
LTA ; LOC100287329
0.641 0.600 6 31572536 intron variant A/G;T snv 34
rs895819
MIR23A ; LOC284454 ; MIR27A ; MIR24-2
0.623 0.560 19 13836478 non coding transcript exon variant T/A;C;G snv 0.34 0.38 46
rs878854066
TP53
0.439 0.800 17 7676153 missense variant GG/AC mnv 213
rs873601
BIVM-ERCC5 ; ERCC5
0.677 0.360 13 102875987 3 prime UTR variant G/A snv 0.59 25
rs861539
KLC1 ; XRCC3
0.519 0.680 14 103699416 missense variant G/A snv 0.29 0.30 104
rs854560
PON1
0.513 0.800 7 95316772 missense variant A/C;G;N;T snv 0.29 113
rs822395
ADIPOQ
0.776 0.240 3 186849018 intron variant C/A;G snv 10
rs8193
CD44
0.925 0.080 11 35229771 3 prime UTR variant C/T snv 0.29 4
rs8126
TNFAIP2
0.807 0.080 14 103137232 3 prime UTR variant C/T snv 0.63 8
rs799917
BRCA1
0.708 0.320 17 43092919 missense variant G/A;C;T snv 0.40; 1.6E-05 18
rs79071878
LOC105379176 ; IL4
0.827 0.240 5 132680652 intron variant ATGAAGCAAGATGGCCTGTTGGGAGGCTACCACAGTAAACCAGGCTAGAGACGATGGTGGCGTGGACAGAATGAAGCAAGATGGCCTGTTGGGAGGCTACCACAGTAAACCAGGCTAGAGATGATGGTGGCGTGGACAGAAT/- del 7
rs7903146
TCF7L2
0.554 0.680 10 112998590 intron variant C/G;T snv 93
rs7853346
PTENP1-AS ; PTENP1
0.851 0.200 9 33676096 non coding transcript exon variant C/G snv 0.28; 1.2E-05 0.32 6
rs7813
GEMIN4
0.689 0.360 17 744946 missense variant G/A;C snv 0.63 22
rs7804372
CAV1
0.716 0.320 7 116554174 intron variant T/A snv 0.27 19
rs779315943
DNMT3A
0.882 0.160 2 25247708 frameshift variant TTTCC/- del 5
rs77724903
RET
0.672 0.280 10 43118460 missense variant A/G;T snv 4.0E-06; 2.1E-03 23
rs773919809
MGMT
0.763 0.200 10 129766957 missense variant C/T snv 2.0E-05 13
rs763780
IL17F
0.531 0.720 6 52236941 missense variant T/C snv 6.7E-02 6.6E-02 87
rs763059810
CXCR4
0.623 0.600 2 136115750 missense variant T/C snv 4.0E-06 41
rs759412116
ERCC2
0.581 0.640 19 45352210 missense variant C/G;T snv 4.0E-06; 6.0E-05 55
rs758272654
GNAS
0.611 0.680 20 58909201 synonymous variant T/C snv 4.0E-06 7.0E-06 50